Retrieve dates of all GDAC Firehose stddata & analyses runs that have been ingested into FireBrowse.

Retrieve miRSeq data.

Retrieve sample counts.

Retrieve mRNASeq data.

Retrieve links to summary reports from Firehose analysis runs.

Obtain identities of TCGA consortium member centers.

Translate TCGA cohort abbreviations to full disease names.

Obtain identities of tissue source sites in TCGA.

Retrieve TCGA CDEs verbatim, i.e. not normalized by Firehose.

Retrieve list of all TCGA patients.

Simple way to discern whether API server is up and running

Translate TCGA platform codes to full platform names.

Retrieve CDEs normalized by Firehose and selected for analyses.

Retrieve names of all columns in the mutation annotation files (MAFs) served by FireBrowse.

Return all TCGA sample type codes, both numeric and symbolic.

Retrieve aggregated analysis features table.

Retrieve MutSig final analysis MAF.

Retrieve Significantly Mutated Genes (SMG).

Retrieve standard data archives.

Retrieve names of all TCGA clinical data elements (CDEs).

Retrieve names of CDEs normalized by Firehose and selected for analyses.

Returns RNASeq expression quartiles, e.g. suitable for drawing a boxplot.

Retrieve all data by genes Gistic2 results.

Retrieve focal data by genes Gistic2 results.

Translate from numeric to symbolic TCGA sample codes.

Retrieve Gistic2 significantly deleted genes results.

Retrieve Gistic2 significantly amplified genes results.

Retrieve all thresholded by genes Gistic2 results.

Given a TCGA barcode, return its short letter sample type code.

Translate from symbolic to numeric TCGA sample codes.

Retrieve dates of all GDAC Firehose stddata & analyses runs that have been ingested into FireBrowse.

Retrieve miRSeq data.

Retrieve sample counts.

Retrieve mRNASeq data.

Retrieve links to summary reports from Firehose analysis runs.

Obtain identities of TCGA consortium member centers.

Translate TCGA cohort abbreviations to full disease names.

Obtain identities of tissue source sites in TCGA.

Retrieve TCGA CDEs verbatim, i.e. not normalized by Firehose.

Retrieve list of all TCGA patients.

Simple way to discern whether API server is up and running

Translate TCGA platform codes to full platform names.

Retrieve CDEs normalized by Firehose and selected for analyses.

Retrieve names of all columns in the mutation annotation files (MAFs) served by FireBrowse.

Return all TCGA sample type codes, both numeric and symbolic.

Retrieve aggregated analysis features table.

Retrieve MutSig final analysis MAF.

Retrieve Significantly Mutated Genes (SMG).

Retrieve standard data archives.

Retrieve names of all TCGA clinical data elements (CDEs).

Retrieve names of CDEs normalized by Firehose and selected for analyses.

Returns RNASeq expression quartiles, e.g. suitable for drawing a boxplot.

Retrieve all data by genes Gistic2 results.

Retrieve focal data by genes Gistic2 results.

Translate from numeric to symbolic TCGA sample codes.

Retrieve Gistic2 significantly deleted genes results.

Retrieve Gistic2 significantly amplified genes results.

Retrieve all thresholded by genes Gistic2 results.

Given a TCGA barcode, return its short letter sample type code.

Translate from symbolic to numeric TCGA sample codes.